MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,288
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,362
Total number of protein coding genes annotated/found:
2,288
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000026.1
SEQF5007_02355
Genome Viewer
NA
AA
909/303
88330-87422
Arginase
SEQF5007|JADGMA010000026.1
SEQF5007_02354
Genome Viewer
NA
AA
807/269
87285-86479
Cyclic di-AMP synthase CdaA
SEQF5007|JADGMA010000026.1
SEQF5007_02353
Genome Viewer
NA
AA
732/244
86477-85746
CdaA regulatory protein CdaR
SEQF5007|JADGMA010000026.1
SEQF5007_02352
Genome Viewer
NA
AA
1359/453
85517-84159
Phosphoglucosamine mutase
SEQF5007|JADGMA010000026.1
SEQF5007_02351
Genome Viewer
NA
AA
1113/371
82959-84071
Mannitol-1-phosphate 5-dehydrogenase
SEQF5007|JADGMA010000026.1
SEQF5007_02350
Genome Viewer
NA
AA
435/145
82525-82959
Mannitol-specific phosphotransferase enzyme IIA component
SEQF5007|JADGMA010000026.1
SEQF5007_02349
Genome Viewer
NA
AA
2028/676
80486-82513
Transcriptional regulator MtlR
SEQF5007|JADGMA010000026.1
SEQF5007_02348
Genome Viewer
NA
AA
1569/523
78885-80453
PTS system mannitol-specific EIICB component
SEQF5007|JADGMA010000026.1
SEQF5007_02347
Genome Viewer
NA
AA
1806/602
78215-76410
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
SEQF5007|JADGMA010000026.1
SEQF5007_02346
Genome Viewer
NA
AA
858/286
76138-75281
Phosphatase YwpJ
SEQF5007|JADGMA010000026.1
SEQF5007_02345
Genome Viewer
NA
AA
1200/400
74016-75215
hypothetical protein
SEQF5007|JADGMA010000026.1
SEQF5007_02344
Genome Viewer
NA
AA
732/244
73882-73151
hypothetical protein
SEQF5007|JADGMA010000026.1
SEQF5007_02343
Genome Viewer
NA
AA
981/327
72113-73093
Cadmium%2C cobalt and zinc/H(+)-K(+) antiporter
SEQF5007|JADGMA010000026.1
SEQF5007_02342
Genome Viewer
NA
AA
327/109
71785-72111
HTH-type transcriptional repressor CzrA
SEQF5007|JADGMA010000026.1
SEQF5007_02341
Genome Viewer
NA
AA
654/218
71638-70985
putative sugar epimerase YhfK
SEQF5007|JADGMA010000026.1
SEQF5007_02340
Genome Viewer
NA
AA
939/313
70520-69582
putative mannose-6-phosphate isomerase GmuF
SEQF5007|JADGMA010000026.1
SEQF5007_02339
Genome Viewer
NA
AA
231/77
69519-69289
hypothetical protein
SEQF5007|JADGMA010000026.1
SEQF5007_02338
Genome Viewer
NA
AA
1377/459
69051-67675
hypothetical protein
SEQF5007|JADGMA010000026.1
SEQF5007_02337
Genome Viewer
NA
AA
411/137
67407-66997
hypothetical protein
SEQF5007|JADGMA010000026.1
SEQF5007_02336
Genome Viewer
NA
AA
447/149
66743-66297
General stress protein 20U
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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